Screening of effective factors in the growth of Paenibacillus polymyxa using Plackett - Burman experimental desig

Authors
1 Department of Food Safety and Quality Control, Research Institute of Food Science and Technology (RIFST), Mashhad, Iran
2 Department of Food Biotechnology, Research Institute of Food Science and Technology, RIFST, Mashhad, Iran
3 Department of Food Science and Technology, Faculty of Agriculture, Ferdowsi University of Mashhad, Mashhad, Iran
Abstract
Paenibacillus polymyxa is one of the microorganisms that has the ability to produce extracellular exopolysaccharides and antibiotics. Several factors, including culture medium content, carbon and nitrogen sources, pH, temperature, air velocity, and culture conditions, have an effect on the growth and production of higher cell mass, as well as the production of microbial metabolites. The purpose of this study was to investigate the growth rate of P. polymyxa in a culture medium containing molasses and to screen five components of the culture medium along with four factors of the fermentation conditions using the Plackett -Burman method to maximize cell mass production. The results showed that among the investigated variables, molasses brix, time, percentage of inoculation, amount of ammonium sulfate, stirring speed, and the amount of glucose and urea, as a first-order equatino, had a significant positive effect on bacterial growth and biomass production. Molasses brix medium was found to be more effective than other variables; however, pH and the amount of low-use elements had a negative effect on cell growth. The findings of this study indicated that molasses-based culture medium can be used as a cost-effective and suitable option for the growth of P. polymyxa.


Keywords

Subjects


1. Raza, W., et al., Optimization, purification, characterization and antioxidant activity of an extracellular polysaccharide produced by Paenibacillus polymyxa SQR-21. Bioresource technology, 2011. 102(10): p. 6095-6103.
2. El-Sayed, M.H., et al., Optimization, purification and physicochemical characterization of curdlan produced by Paenibacillus sp. strain NBR-10. Biosciences Biotechnology Research Asia, 2016. 13(2): p. 901-909.
3. Zhang, F., et al., Biocontrol potential of Paenibacillus polymyxa against Verticillium dahliae infecting cotton plants. Biological Control, 2018. 127: p. 70-77.
4. Huang, X.-Y., et al., Exopolysaccharides of Paenibacillus polymyxa: A review. International Journal of Biological Macromolecules, 2024: p. 129663.
5. Falah, F., et al., Effect of immobilization, mutation, and microbial stresses on increasing production efficiency of “Cyclosporin A”. Biomass Conversion and Biorefinery, 2024. 14(4): p. 4441-4456.
6. Topić Popović, N., et al., Sample preparation and culture condition effects on MALDI‐TOF MS identification of bacteria: A review. Mass spectrometry reviews, 2023. 42(5): p. 1589-1603.
7. Brown, R.W., et al., Nutrient (C, N and P) enrichment induces significant changes in the soil metabolite profile and microbial carbon partitioning. Soil Biology and Biochemistry, 2022. 172: p. 108779.
8. Vasiee, A., et al., Optimization of the production conditions of the lipase produced by Bacillus cereus from rice flour through Plackett-Burman Design (PBD) and response surface methodology (RSM). Microbial Pathogenesis, 2016. 101: p. 36-43.
9. Falah, F., et al., Optimization of γ-aminobutyric acid (GABA) production by Lactobacillus spp. from agro-food waste. Biomass Conversion and Biorefinery, 2024. 14(3): p. 3425-3437.
10. Öz, Y.E. and M. Kalender, A novel static cultivation of bacterial cellulose production from sugar beet molasses: Series static culture (SSC) system. International Journal of Biological Macromolecules, 2023. 225: p. 1306-1314.
11. Saejung, C. and L. Puensungnern, Evaluation of molasses-based medium as a low cost medium for carotenoids and fatty acid production by photosynthetic bacteria. Waste and Biomass Valorization, 2020. 11: p. 143-152.
12. Çakar, F., et al., Improvement production of bacterial cellulose by semi-continuous process in molasses medium. Carbohydrate polymers, 2014. 106: p. 7-13.
13. Ejaz, U., A. Ahmed, and M. Sohail, Statistical optimization of immobilization of yeast cells on corncob for pectinase production. Biocatalysis and Agricultural Biotechnology, 2018. 14: p. 450-456.
14. Stone, M., et al., Standardized evaluation of Zika nucleic acid tests used in clinical settings and blood screening. PLOS Neglected Tropical Diseases, 2023. 17(3): p. e0011157.
15. Triveni, R., T. Shamala, and N. Rastogi, Optimised production and utilisation of exopolysaccharide from Agrobacterium radiobacter. Process Biochemistry, 2001. 36(8-9): p. 787-795.
16. Rafigh, S.M., et al., Optimization of culture medium and modeling of curdlan production from Paenibacillus polymyxa by RSM and ANN. International journal of biological macromolecules, 2014. 70: p. 463-473.
17. Falah, F., et al., Production of cyclosporin A by Tolypocladium inflatum using dairy waste medium: optimization and investigation of the effect of ultrasound, high hydrostatic pressure, and pulsed electric field treatments on the morphology of fungus. Biomass Conversion and Biorefinery, 2023: p. 1-13.
18. Salah, R.B., et al., Fermentation of date palm juice by curdlan gum production from Rhizobium radiobacter ATCC 6466™: Purification, rheological and physico-chemical characterization. LWT-Food Science and Technology, 2011. 44(4): p. 1026-1034.
19. Maier, R.M. and I.L. Pepper, Bacterial growth, in Environmental microbiology. 2015, Elsevier. p. 37-56.
20. Peleg, M. and M.G. Corradini, Microbial growth curves: what the models tell us and what they cannot. Critical reviews in food science and nutrition, 2011. 51(10): p. 917-945.
21. Lee, Y., et al., Occurrence of phenotypic variation in Paenibacillus polymyxa E681 associated with sporulation and carbohydrate metabolism. Biotechnology Reports, 2022. 34: p. e00719.
22. Zhao, T., et al., Isolation and Characterization of Paenibacillus polymyxa B7 and Inhibition of Aspergillus tubingensis A1 by Its Antifungal Substances. International Journal of Molecular Sciences, 2024. 25(4): p. 2195.
23. Kaczmarek, J.A. and K.L. Prather, Effective use of biosensors for high-throughput library screening for metabolite production. Journal of Industrial Microbiology and Biotechnology, 2021. 48(9-10): p. kuab049.
24. Lee, I.Y., et al., Influence of agitation speed on production of curdlan by Agrobacterium species. Bioprocess engineering, 1999. 20: p. 283-287.
25. Shi, Y., et al., Optimization of the fermentation media and growth conditions of Bacillus velezensis BHZ-29 using a Plackett–Burman design experiment combined with response surface methodology. Frontiers in Microbiology, 2024. 15: p. 1355369.
26. Ghasemi, S. and M. Ahmadzadeh, Optimisation of a cost-effective culture medium for the large-scale production of Bacillus subtilis UTB96. Archives of Phytopathology and Plant Protection, 2013. 46(13): p. 1552-1563.
27. Praharyawan, S., D. Susilaningsih, and K. Syamsu, Statistical screening of medium components by plackett–burman experimental design for biosurfactant production by indonesian indigenous Bacillus sp. DSW17. Asian J Microbiol Biotechnol Environ Sci, 2013. 15(4): p. 805-13.
28. Rajendran, A., A. Sundaramurthy, and V. Thangavelu, Statistical evaluation of medium components using Plackett-Burman experimental design and kinetic modeling of lipase production by Bacillus sphaericus. Chemical and biochemical engineering quarterly, 2007. 21(2): p. 181-188.